No transfer learning. Calibration batch size 200. ng backend

--- Resubmitted on 2026-03-30 16:20:57 UTC ---
Changes detected:
  Row count: 111002 → 110569
  Added columns: ['epsilon_precision_mean', 'epsilon_precision_median', 'log2_empirical_mean', 'log2_empirical_median']
Parameter corrections applied:
  ident_fdr_peptide: 'None' → 'nan'
  abundance_normalization_ions: 'None' → 'nan'
  search_engine_version: 'None' → 'nan'
  enable_match_between_runs: 'False' → 'True'
  scan_window: 'None' → 'nan'
  fragment_mass_tolerance: '[-10, 10.0ppm, 10, 10.0ppm]' → '[-10ppm, 10ppm]'
--- PERSISTED_CORRECTIONS ---
CORRECTION:ident_fdr_peptide=nan
CORRECTION:abundance_normalization_ions=nan
CORRECTION:search_engine_version=nan
CORRECTION:enable_match_between_runs=True
CORRECTION:scan_window=nan
CORRECTION:fragment_mass_tolerance=[-10ppm, 10ppm]
--- END_PERSISTED_CORRECTIONS ---