MassChroQ 3.0

--- Resubmitted on 2026-03-30 15:49:40 UTC ---
Changes detected:
  Row count: 74969 → 79650
  Added columns: ['epsilon_precision_mean', 'epsilon_precision_median', 'log2_empirical_mean', 'log2_empirical_median']
  Removed columns: ['logIntensityMean']